/[webpac2]/trunk/run.pl
This is repository of my old source code which isn't updated any more. Go to git.rot13.org for current projects!
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Revision 851 - (show annotations)
Sun May 27 11:14:40 2007 UTC (16 years, 11 months ago) by dpavlin
File MIME type: text/plain
File size: 16274 byte(s)
 r1258@llin:  dpavlin | 2007-05-27 13:14:58 +0200
 Changed delimiter_templates arguments to be more intuitive,
 disable MARC generation when running delimiters validation
 (this is just disk overhead)

1 #!/usr/bin/perl -w
2
3 use strict;
4
5 use Cwd qw/abs_path/;
6 use File::Temp qw/tempdir/;
7 use lib './lib';
8
9 use WebPAC::Common 0.02;
10 use WebPAC::Parser 0.08;
11 use WebPAC::Input 0.16;
12 use WebPAC::Store 0.14;
13 use WebPAC::Normalize 0.22;
14 use WebPAC::Output::TT;
15 use WebPAC::Validate 0.11;
16 use WebPAC::Output::MARC;
17 use WebPAC::Config;
18 use Getopt::Long;
19 use File::Path;
20 use Time::HiRes qw/time/;
21 use File::Slurp;
22 use Data::Dump qw/dump/;
23 use Storable qw/dclone/;
24 use Pod::Usage qw/pod2usage/;
25
26 use Proc::Queue size => 1;
27 use POSIX ":sys_wait_h"; # imports WNOHANG
28
29 =head1 NAME
30
31 run.pl - start WebPAC indexing
32
33 B<this command will probably go away. Don't get used to it!>
34
35 =head1 OPTIONS
36
37 =over 4
38
39 =item --offset 42
40
41 start loading (all) databases at offset 42
42
43 =item --limit 100
44
45 limit loading to 100 records
46
47 =item --clean
48
49 remove database and Hyper Estraier index before indexing
50
51 =item --only=database_name/input_filter
52
53 reindex just single database (legacy name is --one)
54
55 C</input_filter> is optional part which can be C<name>
56 or C<type> from input
57
58 =item --config conf/config.yml
59
60 path to YAML configuration file
61
62 =item --stats
63
64 disable indexing, modify_* in configuration and dump statistics about field
65 and subfield usage for each input
66
67 =item --validate path/to/validation_file
68
69 turn on extra validation of imput records, see L<WebPAC::Validation>
70
71 =item --validate-delimiters path/to/validate_delimiters_file
72
73 this option is used with C<--validate> to turn on extra validation of
74 delimiters. If file is non existant, it will be created on first run.
75
76 =item --marc-generate
77
78 Generate MARC file. This will automatically be on if file contains C<marc*> directives.
79 You can use this option as C<--no-marc-generate> to disable MARC generation.
80
81 =item --marc-lint
82
83 By default turned on if normalisation file has C<marc*> directives. You can disable lint
84 messages with C<--no-marc-lint>.
85
86 =item --marc-dump
87
88 Force dump or input and marc record for debugging.
89
90 =item --parallel 4
91
92 Run databases in parallel (aproximatly same as number of processors in
93 machine if you want to use full load)
94
95 =item --only-links
96
97 Create just links
98
99 =item --merge
100
101 Create merged index of databases which have links
102
103 =back
104
105 =cut
106
107 my $offset;
108 my $limit;
109
110 my $clean = 0;
111 my $config_path;
112 my $debug = 0;
113 my $only_filter;
114 my $stats = 0;
115 my $validate_path;
116 my $validate_delimiters_path;
117 my $marc_generate = 1;
118 my $marc_lint = 1;
119 my $marc_dump = 0;
120 my $parallel = 0;
121 my $only_links = 0;
122 my $merge = 0;
123 my $help;
124
125 my $log = _new WebPAC::Common()->_get_logger();
126
127 GetOptions(
128 "limit=i" => \$limit,
129 "offset=i" => \$offset,
130 "clean" => \$clean,
131 "one=s" => \$only_filter,
132 "only=s" => \$only_filter,
133 "config" => \$config_path,
134 "debug+" => \$debug,
135 "stats" => \$stats,
136 "validate=s" => \$validate_path,
137 "validate-delimiters=s" => \$validate_delimiters_path,
138 "marc-generate!" => \$marc_generate,
139 "marc-lint!" => \$marc_lint,
140 "marc-dump!" => \$marc_dump,
141 "parallel=i" => \$parallel,
142 "only-links!" => \$only_links,
143 "merge" => \$merge,
144 "help" => \$help,
145 );
146
147 $marc_generate = 0 if ( $validate_delimiters_path );
148
149 pod2usage(-verbose => 2) if ($help);
150
151 my $config = new WebPAC::Config( path => $config_path );
152
153 #print "config = ",dump($config) if ($debug);
154
155 die "no databases in config file!\n" unless ($config->databases);
156
157 $log->info( "-" x 79 );
158
159 my $log_file = 'log';
160
161 if (-e $log_file ) { # && -s $log_file > 5 * 1024 * 1024) {
162 $log->info("moved old log with ", -s $log_file, " bytes to '${log_file}.old'");
163 rename $log_file, "${log_file}.old" || $log->logwarn("can't rename $log_file to ${log_file}.old: $!");
164 }
165
166 my $estcmd_fh;
167 my $estcmd_path = './estcmd-merge.sh';
168 if ($merge) {
169 open($estcmd_fh, '>', $estcmd_path) || $log->logdie("can't open $estcmd_path: $!");
170 print $estcmd_fh 'cd /data/estraier/_node/ || exit 1',$/;
171 print $estcmd_fh 'sudo /etc/init.d/hyperestraier stop',$/;
172 $log->info("created merge batch file $estcmd_path");
173 }
174
175 my $validate;
176 $validate = new WebPAC::Validate(
177 path => $validate_path,
178 delimiters => $config->webpac('delimiters'),
179 delimiters_path => $validate_delimiters_path,
180 ) if ($validate_path || $validate_delimiters_path);
181
182 my $use_indexer = $config->use_indexer;
183 $stats ||= $validate;
184 if ($stats) {
185 $log->debug("disabled indexing for stats collection");
186 $use_indexer = undef;
187 } else {
188 $log->info("using $use_indexer indexing engine...");
189 }
190
191 # parse normalize files and create source files for lookup and normalization
192
193 my $parser = new WebPAC::Parser( config => $config );
194
195 my $total_rows = 0;
196 my $start_t = time();
197
198 my @links;
199
200 if ($parallel) {
201 $log->info("Using $parallel processes for speedup");
202 Proc::Queue::size($parallel);
203 }
204
205 sub create_ds_config {
206 my ($db_config, $database, $input, $mfn) = @_;
207 my $c = dclone( $db_config );
208 $c->{_} = $database || $log->logconfess("need database");
209 $c->{_mfn} = $mfn || $log->logconfess("need mfn");
210 $c->{input} = $input || $log->logconfess("need input");
211 return $c;
212 }
213
214 while (my ($database, $db_config) = each %{ $config->databases }) {
215
216 my ($only_database,$only_input) = split(m#/#, $only_filter) if ($only_filter);
217 next if ($only_database && $database !~ m/$only_database/i);
218
219 if ($parallel) {
220 my $f=fork;
221 if(defined ($f) and $f==0) {
222 $log->info("Created processes $$ for speedup");
223 } else {
224 next;
225 }
226 }
227
228 my $indexer;
229 if ($use_indexer && $parser->have_rules( 'search', $database )) {
230
231 my $cfg_name = $use_indexer;
232 $cfg_name =~ s/\-.*$//;
233
234 my $indexer_config = $config->get( $cfg_name ) || $log->logdie("can't find '$cfg_name' part in confguration");
235 $indexer_config->{database} = $database;
236 $indexer_config->{clean} = $clean;
237 $indexer_config->{label} = $db_config->{name};
238
239 # force clean if database has links
240 $indexer_config->{clean} = 1 if ($db_config->{links});
241
242 if ($use_indexer eq 'hyperestraier') {
243
244 # open Hyper Estraier database
245 use WebPAC::Output::Estraier '0.10';
246 $indexer = new WebPAC::Output::Estraier( %{ $indexer_config } );
247
248 } elsif ($use_indexer eq 'hyperestraier-native') {
249
250 # open Hyper Estraier database
251 use WebPAC::Output::EstraierNative;
252 $indexer = new WebPAC::Output::EstraierNative( %{ $indexer_config } );
253
254 } elsif ($use_indexer eq 'kinosearch') {
255
256 # open KinoSearch
257 use WebPAC::Output::KinoSearch;
258 $indexer_config->{clean} = 1 unless (-e $indexer_config->{index_path});
259 $indexer = new WebPAC::Output::KinoSearch( %{ $indexer_config } );
260
261 } else {
262 $log->logdie("unknown use_indexer: $use_indexer");
263 }
264
265 $log->logide("can't continue without valid indexer") unless ($indexer);
266 }
267
268
269 #
270 # store Hyper Estraier links to other databases
271 #
272 if (ref($db_config->{links}) eq 'ARRAY' && $use_indexer) {
273 foreach my $link (@{ $db_config->{links} }) {
274 if ($use_indexer eq 'hyperestraier') {
275 if ($merge) {
276 print $estcmd_fh 'sudo -u www-data estcmd merge ' . $database . ' ' . $link->{to},$/;
277 } else {
278 $log->info("saving link $database -> $link->{to} [$link->{credit}]");
279 push @links, sub {
280 $log->info("adding link $database -> $link->{to} [$link->{credit}]");
281 $indexer->add_link(
282 from => $database,
283 to => $link->{to},
284 credit => $link->{credit},
285 );
286 };
287 }
288 } else {
289 $log->warn("NOT IMPLEMENTED WITH $use_indexer: adding link $database -> $link->{to} [$link->{credit}]");
290 }
291 }
292 }
293 next if ($only_links);
294
295
296 #
297 # now WebPAC::Store
298 #
299 my $abs_path = abs_path($0);
300 $abs_path =~ s#/[^/]*$#/#;
301
302 my $db_path = $config->webpac('db_path');
303
304 if ($clean) {
305 $log->info("creating new database '$database' in $db_path");
306 rmtree( $db_path ) || $log->warn("can't remove $db_path: $!");
307 } else {
308 $log->info("working on database '$database' in $db_path");
309 }
310
311 my $store = new WebPAC::Store(
312 path => $db_path,
313 debug => $debug,
314 );
315
316
317 #
318 # now, iterate through input formats
319 #
320
321 my @inputs;
322 if (ref($db_config->{input}) eq 'ARRAY') {
323 @inputs = @{ $db_config->{input} };
324 } elsif ($db_config->{input}) {
325 push @inputs, $db_config->{input};
326 } else {
327 $log->info("database $database doesn't have inputs defined");
328 }
329
330 foreach my $input (@inputs) {
331
332 my $input_name = $input->{name} || $log->logdie("input without a name isn't valid: ",dump($input));
333
334 next if ($only_input && ($input_name !~ m#$only_input#i && $input->{type} !~ m#$only_input#i));
335
336 my $type = lc($input->{type});
337
338 die "I know only how to handle input types ", join(",", $config->webpac('inputs') ), " not '$type'!\n" unless (grep(/$type/, $config->webpac('inputs')));
339
340 my $input_module = $config->webpac('inputs')->{$type};
341
342 my @lookups = $parser->have_lookup_create($database, $input);
343
344 $log->info("working on input '$input_name' in $input->{path} [type: $input->{type}] using $input_module",
345 @lookups ? " creating lookups: ".join(", ", @lookups) : ""
346 );
347
348 if ($stats) {
349 # disable modification of records if --stats is in use
350 delete($input->{modify_records});
351 delete($input->{modify_file});
352 }
353
354 my $input_db = new WebPAC::Input(
355 module => $input_module,
356 encoding => $config->webpac('webpac_encoding'),
357 limit => $limit || $input->{limit},
358 offset => $offset,
359 recode => $input->{recode},
360 stats => $stats,
361 modify_records => $input->{modify_records},
362 modify_file => $input->{modify_file},
363 );
364 $log->logdie("can't create input using $input_module") unless ($input);
365
366 if (defined( $input->{lookup} )) {
367 $log->warn("$database/$input_name has depriciated lookup definition, removing it...");
368 delete( $input->{lookup} );
369 }
370
371 my $lookup_coderef;
372
373 if (@lookups) {
374
375 my $rules = $parser->lookup_create_rules($database, $input) || $log->logdie("no rules found for $database/$input");
376
377 $lookup_coderef = sub {
378 my $rec = shift || die "need rec!";
379 my $mfn = $rec->{'000'}->[0] || die "need mfn in 000";
380
381 WebPAC::Normalize::data_structure(
382 row => $rec,
383 rules => $rules,
384 config => create_ds_config( $db_config, $database, $input, $mfn ),
385 );
386
387 #warn "current lookup: ", dump(WebPAC::Normalize::_get_lookup());
388 };
389
390 WebPAC::Normalize::_set_lookup( undef );
391
392 $log->debug("created lookup_coderef using:\n$rules");
393
394 };
395
396 my $lookup_jar;
397
398 my $maxmfn = $input_db->open(
399 path => $input->{path},
400 code_page => $input->{encoding}, # database encoding
401 lookup_coderef => $lookup_coderef,
402 lookup => $lookup_jar,
403 %{ $input },
404 load_row => sub {
405 my $a = shift;
406 return $store->load_row(
407 database => $database,
408 input => $input_name,
409 id => $a->{id},
410 );
411 },
412 save_row => sub {
413 my $a = shift;
414 return $store->save_row(
415 database => $database,
416 input => $input_name,
417 id => $a->{id},
418 row => $a->{row},
419 );
420 },
421
422 );
423
424 my $lookup_data = WebPAC::Normalize::_get_lookup();
425
426 if (defined( $lookup_data->{$database}->{$input_name} )) {
427 $log->debug("created following lookups: ", sub { dump( $lookup_data ) } );
428
429 foreach my $key (keys %{ $lookup_data->{$database}->{$input_name} }) {
430 $store->save_lookup(
431 database => $database,
432 input => $input_name,
433 key => $key,
434 data => $lookup_data->{$database}->{$input_name}->{$key},
435 );
436 }
437 }
438
439 my $report_fh;
440 if ($stats || $validate) {
441 my $path = "out/report/${database}-${input_name}.txt";
442 open($report_fh, '>', $path) || $log->logdie("can't open $path: $!");
443
444 print $report_fh "Report for database '$database' input '$input_name' records ",
445 $offset || 1, "-", $limit || $input->{limit} || $maxmfn, "\n\n";
446 $log->info("Generating report file $path");
447 }
448
449 my $marc;
450 if ($marc_generate && $parser->have_rules( 'marc', $database, $input_name )) {
451 $marc = new WebPAC::Output::MARC(
452 path => "out/marc/${database}-${input_name}.marc",
453 lint => $marc_lint,
454 dump => $marc_dump,
455 );
456 }
457
458 my $rules = $parser->normalize_rules($database,$input_name) || $log->logdie("no normalize rules found for $database/$input_name");
459 $log->debug("parsed normalize rules:\n$rules");
460
461 # reset position in database
462 $input_db->seek(1);
463
464 # generate name of config key for indexer (strip everything after -)
465 my $indexer_config = $use_indexer;
466 $indexer_config =~ s/^(\w+)-?.*$/$1/g if ($indexer_config);
467
468 my $lookup_hash;
469 my $depends = $parser->depends($database,$input_name);
470
471 if ($depends) {
472 $log->debug("$database/$input_name depends on: ", dump($depends)) if ($depends);
473 $log->logdie("parser->depends didn't return HASH") unless (ref($depends) eq 'HASH');
474
475 foreach my $db (keys %$depends) {
476 foreach my $i (keys %{$depends->{$db}}) {
477 foreach my $k (keys %{$depends->{$db}->{$i}}) {
478 my $t = time();
479 $log->debug("loading lookup $db/$i");
480 $lookup_hash->{$db}->{$i}->{$k} = $store->load_lookup(
481 database => $db,
482 input => $i,
483 key => $k,
484 );
485 $log->debug(sprintf("lookup $db/$i took %.2fs", time() - $t));
486 }
487 }
488 }
489
490 $log->debug("lookup_hash = ", sub { dump( $lookup_hash ) });
491 }
492
493
494 foreach my $pos ( 0 ... $input_db->size ) {
495
496 my $row = $input_db->fetch || next;
497
498 $total_rows++;
499
500 my $mfn = $row->{'000'}->[0];
501
502 if (! $mfn || $mfn !~ m#^\d+$#) {
503 $log->warn("record $pos doesn't have valid MFN but '$mfn', using $pos");
504 $mfn = $pos;
505 push @{ $row->{'000'} }, $pos;
506 }
507
508
509 if ($validate) {
510 if ( my $errors = $validate->validate_rec( $row, $input_db->dump_ascii ) ) {
511 $log->error( "MFN $mfn validation error:\n",
512 $validate->report_error( $errors )
513 );
514 }
515 next; # validation doesn't create any output
516 }
517
518 my $ds = WebPAC::Normalize::data_structure(
519 row => $row,
520 rules => $rules,
521 lookup => $lookup_hash,
522 config => create_ds_config( $db_config, $database, $input, $mfn ),
523 marc_encoding => 'utf-8',
524 load_row_coderef => sub {
525 my ($database,$input,$mfn) = @_;
526 return $store->load_row(
527 database => $database,
528 input => $input,
529 id => $mfn,
530 );
531 },
532 );
533
534 $log->debug("ds = ", sub { dump($ds) }) if ($ds);
535
536 $store->save_ds(
537 database => $database,
538 input => $input_name,
539 id => $mfn,
540 ds => $ds,
541 ) if ($ds && !$stats);
542
543 $indexer->add(
544 id => "${input_name}/${mfn}",
545 ds => $ds,
546 type => $config->get($indexer_config)->{type},
547 ) if ($indexer && $ds);
548
549 if ($marc) {
550 my $i = 0;
551
552 while (my $fields = WebPAC::Normalize::_get_marc_fields( fetch_next => 1 ) ) {
553 $marc->add(
554 id => $mfn . ( $i ? "/$i" : '' ),
555 fields => $fields,
556 leader => WebPAC::Normalize::_get_marc_leader(),
557 row => $row,
558 );
559 $i++;
560 }
561
562 $log->info("Created $i instances of MFN $mfn\n") if ($i > 1);
563 }
564 }
565
566 if ($validate) {
567 my $errors = $validate->report;
568 if ($errors) {
569 $log->info("validation errors:\n$errors\n" );
570 print $report_fh "$errors\n" if ($report_fh);
571 }
572
573 print $report_fh "\nAll possible subfields/delimiter templates:\n", $validate->delimiters_templates( report => 1, current_input => 1 ), "\n\n";
574
575 # must be last thing that touches $validate for this input
576 $validate->reset;
577 }
578
579 if ($stats) {
580 my $s = $input_db->stats;
581 $log->info("statistics of fields usage:\n$s");
582 print $report_fh "Statistics of fields usage:\n$s" if ($report_fh);
583 }
584
585 # close MARC file
586 $marc->finish if ($marc);
587
588 # close report
589 close($report_fh) if ($report_fh);
590 }
591
592 eval { $indexer->finish } if ($indexer && $indexer->can('finish'));
593
594 my $dt = time() - $start_t;
595 $log->info("$total_rows records ", $indexer ? "indexed " : "",
596 sprintf("in %.2f sec [%.2f rec/sec]",
597 $dt, ($total_rows / $dt)
598 )
599 );
600
601
602 # end forked process
603 if ($parallel) {
604 $log->info("parallel process $$ finished");
605 exit(0);
606 }
607
608 }
609
610 if ($parallel) {
611 # wait all children to finish
612 sleep(1) while wait != -1;
613 $log->info("all parallel processes finished");
614 }
615
616 # save new delimiters if needed
617 $validate->save_delimiters_templates if ( $validate );
618
619 #
620 # handle links or merge after indexing
621 #
622
623 if ($merge) {
624 print $estcmd_fh 'sudo /etc/init.d/hyperestraier start',$/;
625 close($estcmd_fh);
626 chmod 0700, $estcmd_path || $log->warn("can't chmod 0700 $estcmd_path: $!");
627 system $estcmd_path;
628 } else {
629 foreach my $link (@links) {
630 $log->logdie("coderef in link ", Dumper($link), " is ", ref($link), " and not CODE") unless (ref($link) eq 'CODE');
631 $link->();
632 }
633 }

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