/[webpac2]/trunk/lib/WebPAC/Input.pm
This is repository of my old source code which isn't updated any more. Go to git.rot13.org for current projects!
ViewVC logotype

Annotation of /trunk/lib/WebPAC/Input.pm

Parent Directory Parent Directory | Revision Log Revision Log


Revision 625 - (hide annotations)
Sat Aug 26 12:00:36 2006 UTC (17 years, 8 months ago) by dpavlin
File size: 14927 byte(s)
 r878@llin:  dpavlin | 2006-08-26 14:00:08 +0200
 removed some debugging output (or moved it to debug level), few tweaks [2.26]

1 dpavlin 1 package WebPAC::Input;
2    
3     use warnings;
4     use strict;
5    
6 dpavlin 507 use blib;
7    
8 dpavlin 487 use WebPAC::Common;
9 dpavlin 285 use base qw/WebPAC::Common/;
10 dpavlin 308 use Data::Dumper;
11 dpavlin 624 use Encode qw/from_to/;
12 dpavlin 285
13 dpavlin 1 =head1 NAME
14    
15 dpavlin 286 WebPAC::Input - read different file formats into WebPAC
16 dpavlin 1
17     =head1 VERSION
18    
19 dpavlin 619 Version 0.11
20 dpavlin 1
21     =cut
22    
23 dpavlin 619 our $VERSION = '0.11';
24 dpavlin 1
25     =head1 SYNOPSIS
26    
27 dpavlin 286 This module implements input as database which have fixed and known
28     I<size> while indexing and single unique numeric identifier for database
29     position ranging from 1 to I<size>.
30 dpavlin 1
31 dpavlin 286 Simply, something that is indexed by unmber from 1 .. I<size>.
32    
33     Examples of such databases are CDS/ISIS files, MARC files, lines in
34     text file, and so on.
35    
36     Specific file formats are implemented using low-level interface modules,
37     located in C<WebPAC::Input::*> namespace which export C<open_db>,
38     C<fetch_rec> and optional C<init> functions.
39    
40 dpavlin 1 Perhaps a little code snippet.
41    
42 dpavlin 597 use WebPAC::Input;
43 dpavlin 1
44 dpavlin 597 my $db = WebPAC::Input->new(
45     module => 'WebPAC::Input::ISIS',
46 dpavlin 286 low_mem => 1,
47 dpavlin 597 );
48 dpavlin 1
49 dpavlin 597 $db->open( path => '/path/to/database' );
50 dpavlin 416 print "database size: ",$db->size,"\n";
51     while (my $rec = $db->fetch) {
52     # do something with $rec
53     }
54 dpavlin 1
55 dpavlin 286
56    
57 dpavlin 1 =head1 FUNCTIONS
58    
59 dpavlin 3 =head2 new
60 dpavlin 1
61 dpavlin 3 Create new input database object.
62    
63 dpavlin 9 my $db = new WebPAC::Input(
64 dpavlin 286 module => 'WebPAC::Input::MARC',
65 dpavlin 585 encoding => 'ISO-8859-2',
66 dpavlin 10 low_mem => 1,
67 dpavlin 416 recode => 'char pairs',
68 dpavlin 483 no_progress_bar => 1,
69 dpavlin 9 );
70 dpavlin 3
71 dpavlin 597 C<module> is low-level file format module. See L<WebPAC::Input::ISIS> and
72 dpavlin 286 L<WebPAC::Input::MARC>.
73    
74 dpavlin 585 Optional parametar C<encoding> specify application code page (which will be
75 dpavlin 9 used internally). This should probably be your terminal encoding, and by
76     default, it C<ISO-8859-2>.
77    
78 dpavlin 10 Default is not to use C<low_mem> options (see L<MEMORY USAGE> below).
79    
80 dpavlin 483 C<recode> is optional string constisting of character or words pairs that
81     should be replaced in input stream.
82    
83     C<no_progress_bar> disables progress bar output on C<STDOUT>
84    
85 dpavlin 285 This function will also call low-level C<init> if it exists with same
86     parametars.
87    
88 dpavlin 1 =cut
89    
90 dpavlin 3 sub new {
91 dpavlin 285 my $class = shift;
92     my $self = {@_};
93 dpavlin 3 bless($self, $class);
94    
95 dpavlin 285 my $log = $self->_get_logger;
96    
97 dpavlin 585 $log->logconfess("code_page argument is not suppored any more. change it to encoding") if ($self->{lookup});
98     $log->logconfess("lookup argument is not suppored any more. rewrite call to lookup_ref") if ($self->{lookup});
99    
100 dpavlin 286 $log->logconfess("specify low-level file format module") unless ($self->{module});
101     my $module = $self->{module};
102     $module =~ s#::#/#g;
103     $module .= '.pm';
104     $log->debug("require low-level module $self->{module} from $module");
105 dpavlin 289
106 dpavlin 286 require $module;
107 dpavlin 289 #eval $self->{module} .'->import';
108 dpavlin 286
109 dpavlin 285 # check if required subclasses are implemented
110 dpavlin 289 foreach my $subclass (qw/open_db fetch_rec init/) {
111     my $n = $self->{module} . '::' . $subclass;
112     if (! defined &{ $n }) {
113 dpavlin 290 my $missing = "missing $subclass in $self->{module}";
114 dpavlin 301 $self->{$subclass} = sub { $log->logwarn($missing) };
115 dpavlin 286 } else {
116 dpavlin 289 $self->{$subclass} = \&{ $n };
117 dpavlin 286 }
118 dpavlin 285 }
119    
120 dpavlin 289 if ($self->{init}) {
121 dpavlin 285 $log->debug("calling init");
122 dpavlin 289 $self->{init}->($self, @_);
123 dpavlin 285 }
124    
125 dpavlin 585 $self->{'encoding'} ||= 'ISO-8859-2';
126 dpavlin 9
127 dpavlin 10 # running with low_mem flag? well, use DBM::Deep then.
128     if ($self->{'low_mem'}) {
129     $log->info("running with low_mem which impacts performance (<32 Mb memory usage)");
130    
131     my $db_file = "data.db";
132    
133     if (-e $db_file) {
134     unlink $db_file or $log->logdie("can't remove '$db_file' from last run");
135     $log->debug("removed '$db_file' from last run");
136     }
137    
138     require DBM::Deep;
139    
140     my $db = new DBM::Deep $db_file;
141    
142     $log->logdie("DBM::Deep error: $!") unless ($db);
143    
144     if ($db->error()) {
145     $log->logdie("can't open '$db_file' under low_mem: ",$db->error());
146     } else {
147     $log->debug("using file '$db_file' for DBM::Deep");
148     }
149    
150     $self->{'db'} = $db;
151     }
152    
153 dpavlin 3 $self ? return $self : return undef;
154 dpavlin 1 }
155    
156 dpavlin 285 =head2 open
157    
158     This function will read whole database in memory and produce lookups.
159    
160 dpavlin 286 $input->open(
161 dpavlin 285 path => '/path/to/database/file',
162 dpavlin 624 code_page => 'cp852',
163 dpavlin 286 limit => 500,
164     offset => 6000,
165 dpavlin 285 lookup => $lookup_obj,
166 dpavlin 506 stats => 1,
167 dpavlin 585 lookup_ref => sub {
168     my ($k,$v) = @_;
169     # store lookup $k => $v
170     },
171 dpavlin 597 modify_records => {
172     900 => { '^a' => { ' : ' => '^b' } },
173     901 => { '*' => { '^b' => ' ; ' } },
174     },
175 dpavlin 285 );
176    
177 dpavlin 624 By default, C<code_page> is assumed to be C<cp852>.
178 dpavlin 285
179 dpavlin 286 C<offset> is optional parametar to position at some offset before reading from database.
180 dpavlin 285
181 dpavlin 286 C<limit> is optional parametar to read just C<limit> records from database
182 dpavlin 285
183 dpavlin 506 C<stats> create optional report about usage of fields and subfields
184    
185 dpavlin 597 C<lookup_coderef> is closure to call when adding C<< key => 'value' >> combinations to
186 dpavlin 585 lookup.
187    
188 dpavlin 597 C<modify_records> specify mapping from subfields to delimiters or from
189     delimiters to subfields, as well as oprations on fields (if subfield is
190     defined as C<*>.
191    
192 dpavlin 286 Returns size of database, regardless of C<offset> and C<limit>
193     parametars, see also C<size>.
194 dpavlin 285
195     =cut
196    
197     sub open {
198     my $self = shift;
199     my $arg = {@_};
200    
201     my $log = $self->_get_logger();
202    
203 dpavlin 585 $log->logconfess("lookup argument is not suppored any more. rewrite call to lookup_coderef") if ($arg->{lookup});
204     $log->logconfess("lookup_coderef must be CODE, not ",ref($arg->{lookup_coderef}))
205     if ($arg->{lookup_coderef} && ref($arg->{lookup_coderef}) ne 'CODE');
206    
207 dpavlin 285 $log->logcroak("need path") if (! $arg->{'path'});
208 dpavlin 624 my $code_page = $arg->{'code_page'} || 'cp852';
209 dpavlin 285
210     # store data in object
211 dpavlin 292 $self->{'input_code_page'} = $code_page;
212 dpavlin 286 foreach my $v (qw/path offset limit/) {
213 dpavlin 285 $self->{$v} = $arg->{$v} if ($arg->{$v});
214     }
215    
216 dpavlin 416 my $filter_ref;
217 dpavlin 597 my $recode_regex;
218     my $recode_map;
219 dpavlin 416
220     if ($self->{recode}) {
221     my @r = split(/\s/, $self->{recode});
222     if ($#r % 2 != 1) {
223     $log->logwarn("recode needs even number of elements (some number of valid pairs)");
224     } else {
225     while (@r) {
226     my $from = shift @r;
227     my $to = shift @r;
228 dpavlin 597 $recode_map->{$from} = $to;
229 dpavlin 416 }
230    
231 dpavlin 597 $recode_regex = join '|' => keys %{ $recode_map };
232 dpavlin 416
233 dpavlin 597 $log->debug("using recode regex: $recode_regex");
234 dpavlin 416 }
235    
236     }
237    
238 dpavlin 597 my $rec_regex = $self->modify_record_regexps(%{ $arg->{modify_records} });
239     $log->debug("rec_regex: ", Dumper($rec_regex));
240    
241 dpavlin 289 my ($db, $size) = $self->{open_db}->( $self,
242 dpavlin 285 path => $arg->{path},
243 dpavlin 624 # filter => sub {
244     # my ($l,$f_nr) = @_;
245     # return unless defined($l);
246     # from_to($l, $code_page, $self->{'encoding'});
247     # $l =~ s/($recode_regex)/$recode_map->{$1}/g if ($recode_regex && $recode_map);
248     # return $l;
249     # },
250 dpavlin 523 %{ $arg },
251 dpavlin 285 );
252    
253 dpavlin 496 unless (defined($db)) {
254 dpavlin 285 $log->logwarn("can't open database $arg->{path}, skipping...");
255     return;
256     }
257    
258     unless ($size) {
259     $log->logwarn("no records in database $arg->{path}, skipping...");
260     return;
261     }
262    
263 dpavlin 339 my $from_rec = 1;
264     my $to_rec = $size;
265 dpavlin 285
266 dpavlin 286 if (my $s = $self->{offset}) {
267 dpavlin 513 $log->debug("skipping to MFN $s");
268 dpavlin 339 $from_rec = $s;
269 dpavlin 285 } else {
270 dpavlin 339 $self->{offset} = $from_rec;
271 dpavlin 285 }
272    
273 dpavlin 286 if ($self->{limit}) {
274 dpavlin 301 $log->debug("limiting to ",$self->{limit}," records");
275 dpavlin 339 $to_rec = $from_rec + $self->{limit} - 1;
276     $to_rec = $size if ($to_rec > $size);
277 dpavlin 285 }
278    
279     # store size for later
280 dpavlin 339 $self->{size} = ($to_rec - $from_rec) ? ($to_rec - $from_rec + 1) : 0;
281 dpavlin 285
282 dpavlin 585 $log->info("processing $self->{size}/$size records [$from_rec-$to_rec] convert $code_page -> $self->{encoding}", $self->{stats} ? ' [stats]' : '');
283 dpavlin 285
284     # read database
285 dpavlin 339 for (my $pos = $from_rec; $pos <= $to_rec; $pos++) {
286 dpavlin 285
287 dpavlin 286 $log->debug("position: $pos\n");
288 dpavlin 285
289 dpavlin 619 my $rec = $self->{fetch_rec}->($self, $db, $pos, sub {
290     my ($l,$f_nr) = @_;
291 dpavlin 624 # return unless defined($l);
292     # return $l unless ($rec_regex && $f_nr);
293 dpavlin 285
294 dpavlin 625 $log->debug("-=> $f_nr ## $l");
295    
296 dpavlin 624 # codepage conversion and recode_regex
297     # from_to($l, $code_page, $self->{'encoding'});
298     from_to($l, $code_page, 'utf-8');
299     $l =~ s/($recode_regex)/$recode_map->{$1}/g if ($recode_regex && $recode_map);
300    
301 dpavlin 619 # apply regexps
302     if ($rec_regex && defined($rec_regex->{$f_nr})) {
303     $log->logconfess("regexps->{$f_nr} must be ARRAY") if (ref($rec_regex->{$f_nr}) ne 'ARRAY');
304     my $c = 0;
305     foreach my $r (@{ $rec_regex->{$f_nr} }) {
306     #$log->debug("\$l = $l\neval \$l =~ $r");
307     eval '$l =~ ' . $r;
308     $log->error("error applying regex: $r") if ($@);
309     }
310     }
311    
312 dpavlin 625 $log->debug("<=- $f_nr ## $l");
313 dpavlin 619 return $l;
314     });
315    
316 dpavlin 308 $log->debug(sub { Dumper($rec) });
317    
318 dpavlin 285 if (! $rec) {
319 dpavlin 286 $log->warn("record $pos empty? skipping...");
320 dpavlin 285 next;
321     }
322    
323     # store
324 dpavlin 286 if ($self->{low_mem}) {
325     $self->{db}->put($pos, $rec);
326 dpavlin 285 } else {
327 dpavlin 286 $self->{data}->{$pos} = $rec;
328 dpavlin 285 }
329    
330     # create lookup
331 dpavlin 585 $arg->{'lookup_coderef'}->( $rec ) if ($rec && $arg->{'lookup_coderef'});
332 dpavlin 285
333 dpavlin 506 # update counters for statistics
334     if ($self->{stats}) {
335 dpavlin 593
336 dpavlin 619 # fetch clean record with regexpes applied for statistics
337     my $rec = $self->{fetch_rec}->($self, $db, $pos);
338    
339 dpavlin 593 foreach my $fld (keys %{ $rec }) {
340 dpavlin 506 $self->{_stats}->{fld}->{ $fld }++;
341 dpavlin 593
342     $log->logdie("invalid record fild $fld, not ARRAY")
343     unless (ref($rec->{ $fld }) eq 'ARRAY');
344    
345     foreach my $row (@{ $rec->{$fld} }) {
346    
347     if (ref($row) eq 'HASH') {
348    
349     foreach my $sf (keys %{ $row }) {
350 dpavlin 619 next if ($sf eq 'subfields');
351 dpavlin 593 $self->{_stats}->{sf}->{ $fld }->{ $sf }->{count}++;
352     $self->{_stats}->{sf}->{ $fld }->{ $sf }->{repeatable}++
353     if (ref($row->{$sf}) eq 'ARRAY');
354 dpavlin 506 }
355 dpavlin 593
356     } else {
357     $self->{_stats}->{repeatable}->{ $fld }++;
358     }
359 dpavlin 506 }
360 dpavlin 593 }
361 dpavlin 506 }
362    
363 dpavlin 483 $self->progress_bar($pos,$to_rec) unless ($self->{no_progress_bar});
364 dpavlin 285
365     }
366    
367 dpavlin 286 $self->{pos} = -1;
368     $self->{last_pcnt} = 0;
369 dpavlin 285
370     # store max mfn and return it.
371 dpavlin 339 $self->{max_pos} = $to_rec;
372     $log->debug("max_pos: $to_rec");
373 dpavlin 285
374     return $size;
375     }
376    
377     =head2 fetch
378    
379     Fetch next record from database. It will also displays progress bar.
380    
381     my $rec = $isis->fetch;
382    
383     Record from this function should probably go to C<data_structure> for
384     normalisation.
385    
386     =cut
387    
388     sub fetch {
389     my $self = shift;
390    
391     my $log = $self->_get_logger();
392    
393 dpavlin 286 $log->logconfess("it seems that you didn't load database!") unless ($self->{pos});
394 dpavlin 285
395 dpavlin 286 if ($self->{pos} == -1) {
396     $self->{pos} = $self->{offset};
397 dpavlin 285 } else {
398 dpavlin 286 $self->{pos}++;
399 dpavlin 285 }
400    
401 dpavlin 286 my $mfn = $self->{pos};
402 dpavlin 285
403 dpavlin 286 if ($mfn > $self->{max_pos}) {
404     $self->{pos} = $self->{max_pos};
405 dpavlin 285 $log->debug("at EOF");
406     return;
407     }
408    
409 dpavlin 483 $self->progress_bar($mfn,$self->{max_pos}) unless ($self->{no_progress_bar});
410 dpavlin 285
411     my $rec;
412    
413 dpavlin 286 if ($self->{low_mem}) {
414     $rec = $self->{db}->get($mfn);
415 dpavlin 285 } else {
416 dpavlin 286 $rec = $self->{data}->{$mfn};
417 dpavlin 285 }
418    
419     $rec ||= 0E0;
420     }
421    
422     =head2 pos
423    
424     Returns current record number (MFN).
425    
426     print $isis->pos;
427    
428     First record in database has position 1.
429    
430     =cut
431    
432     sub pos {
433     my $self = shift;
434 dpavlin 286 return $self->{pos};
435 dpavlin 285 }
436    
437    
438     =head2 size
439    
440     Returns number of records in database
441    
442     print $isis->size;
443    
444     Result from this function can be used to loop through all records
445    
446     foreach my $mfn ( 1 ... $isis->size ) { ... }
447    
448 dpavlin 286 because it takes into account C<offset> and C<limit>.
449 dpavlin 285
450     =cut
451    
452     sub size {
453     my $self = shift;
454 dpavlin 286 return $self->{size};
455 dpavlin 285 }
456    
457     =head2 seek
458    
459     Seek to specified MFN in file.
460    
461     $isis->seek(42);
462    
463     First record in database has position 1.
464    
465     =cut
466    
467     sub seek {
468     my $self = shift;
469     my $pos = shift || return;
470    
471     my $log = $self->_get_logger();
472    
473     if ($pos < 1) {
474     $log->warn("seek before first record");
475     $pos = 1;
476 dpavlin 286 } elsif ($pos > $self->{max_pos}) {
477 dpavlin 285 $log->warn("seek beyond last record");
478 dpavlin 286 $pos = $self->{max_pos};
479 dpavlin 285 }
480    
481 dpavlin 286 return $self->{pos} = (($pos - 1) || -1);
482 dpavlin 285 }
483    
484 dpavlin 506 =head2 stats
485 dpavlin 285
486 dpavlin 506 Dump statistics about field and subfield usage
487    
488 dpavlin 507 print $input->stats;
489 dpavlin 506
490     =cut
491    
492     sub stats {
493     my $self = shift;
494 dpavlin 507
495     my $log = $self->_get_logger();
496    
497     my $s = $self->{_stats};
498     if (! $s) {
499     $log->warn("called stats, but there is no statistics collected");
500     return;
501     }
502    
503     my $max_fld = 0;
504    
505     my $out = join("\n",
506     map {
507     my $f = $_ || die "no field";
508     my $v = $s->{fld}->{$f} || die "no s->{fld}->{$f}";
509     $max_fld = $v if ($v > $max_fld);
510    
511 dpavlin 519 my $o = sprintf("%4s %d ~", $f, $v);
512 dpavlin 507
513     if (defined($s->{sf}->{$f})) {
514     map {
515 dpavlin 593 $o .= sprintf(" %s:%d%s", $_,
516     $s->{sf}->{$f}->{$_}->{count},
517     $s->{sf}->{$f}->{$_}->{repeatable} ? '*' : '',
518     );
519 dpavlin 507 } sort keys %{ $s->{sf}->{$f} };
520     }
521    
522     if (my $v_r = $s->{repeatable}->{$f}) {
523     $o .= " ($v_r)" if ($v_r != $v);
524     }
525    
526     $o;
527 dpavlin 519 } sort { $a cmp $b } keys %{ $s->{fld} }
528 dpavlin 507 );
529    
530     $log->debug( sub { Dumper($s) } );
531    
532     return $out;
533 dpavlin 506 }
534    
535 dpavlin 598 =head2 modify_record_regexps
536 dpavlin 597
537     Generate hash with regexpes to be applied using L<filter>.
538    
539     my $regexpes = $input->modify_record_regexps(
540     900 => { '^a' => { ' : ' => '^b' } },
541     901 => { '*' => { '^b' => ' ; ' } },
542     );
543    
544     =cut
545    
546     sub modify_record_regexps {
547     my $self = shift;
548     my $modify_record = {@_};
549    
550     my $regexpes;
551    
552     foreach my $f (keys %$modify_record) {
553     warn "--- f: $f\n";
554     foreach my $sf (keys %{ $modify_record->{$f} }) {
555     warn "---- sf: $sf\n";
556     foreach my $from (keys %{ $modify_record->{$f}->{$sf} }) {
557     my $to = $modify_record->{$f}->{$sf}->{$from};
558     #die "no field?" unless defined($to);
559     warn "----- transform: |$from| -> |$to|\n";
560    
561     if ($sf =~ /^\^/) {
562     my $regex =
563     's/\Q'. $sf .'\E([^\^]+)\Q'. $from .'\E([^\^]+)/'. $sf .'$1'. $to .'$2/g';
564     push @{ $regexpes->{$f} }, $regex;
565     warn ">>>>> $regex [sf]\n";
566     } else {
567     my $regex =
568     's/\Q'. $from .'\E/'. $to .'/g';
569     push @{ $regexpes->{$f} }, $regex;
570     warn ">>>>> $regex [global]\n";
571     }
572    
573     }
574     }
575     }
576    
577     return $regexpes;
578     }
579    
580 dpavlin 3 =head1 MEMORY USAGE
581 dpavlin 1
582 dpavlin 3 C<low_mem> options is double-edged sword. If enabled, WebPAC
583     will run on memory constraint machines (which doesn't have enough
584     physical RAM to create memory structure for whole source database).
585 dpavlin 1
586 dpavlin 3 If your machine has 512Mb or more of RAM and database is around 10000 records,
587     memory shouldn't be an issue. If you don't have enough physical RAM, you
588     might consider using virtual memory (if your operating system is handling it
589     well, like on FreeBSD or Linux) instead of dropping to L<DBM::Deep> to handle
590     parsed structure of ISIS database (this is what C<low_mem> option does).
591 dpavlin 1
592 dpavlin 3 Hitting swap at end of reading source database is probably o.k. However,
593     hitting swap before 90% will dramatically decrease performance and you will
594     be better off with C<low_mem> and using rest of availble memory for
595     operating system disk cache (Linux is particuallary good about this).
596     However, every access to database record will require disk access, so
597     generation phase will be slower 10-100 times.
598    
599     Parsed structures are essential - you just have option to trade RAM memory
600     (which is fast) for disk space (which is slow). Be sure to have planty of
601     disk space if you are using C<low_mem> and thus L<DBM::Deep>.
602    
603     However, when WebPAC is running on desktop machines (or laptops :-), it's
604     highly undesireable for system to start swapping. Using C<low_mem> option can
605     reduce WecPAC memory usage to around 64Mb for same database with lookup
606     fields and sorted indexes which stay in RAM. Performance will suffer, but
607     memory usage will really be minimal. It might be also more confortable to
608     run WebPAC reniced on those machines.
609    
610    
611     =head1 AUTHOR
612    
613     Dobrica Pavlinusic, C<< <dpavlin@rot13.org> >>
614    
615 dpavlin 1 =head1 COPYRIGHT & LICENSE
616    
617 dpavlin 599 Copyright 2005-2006 Dobrica Pavlinusic, All Rights Reserved.
618 dpavlin 1
619     This program is free software; you can redistribute it and/or modify it
620     under the same terms as Perl itself.
621    
622     =cut
623    
624     1; # End of WebPAC::Input

  ViewVC Help
Powered by ViewVC 1.1.26