/[webpac2]/trunk/bin/isi-download-results.pl
This is repository of my old source code which isn't updated any more. Go to git.rot13.org for current projects!
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Contents of /trunk/bin/isi-download-results.pl

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Revision 1300 - (show annotations)
Sat Sep 19 23:49:04 2009 UTC (14 years, 7 months ago) by dpavlin
File MIME type: text/plain
File size: 4526 byte(s)
$cites_by_year as default for faster searching
1 #!/usr/bin/perl
2
3 use warnings;
4 use strict;
5
6 # Advanced search syntax:
7 # http://images.isiknowledge.com/WOK46/help/WOS/h_advanced_examples.html
8
9 our $q = 'AD=Croatia';
10 my $range_size = 500;
11 my $overlap = 3; # between previous and this range
12 my $skip_results = 1;
13 my $cites_by_year = 1;
14
15 my $max_cites = 5000; # ISI limit to get cites
16
17 if ( 0 ) {
18 $q = 'TS=psychology AND AD=Croatia';
19 $range_size = 50;
20 $overlap = 0;
21 $max_cites = 50;
22 }
23
24 use WWW::Mechanize;
25 use Data::Dump qw(dump);
26 use File::Path;
27
28 our $mech = WWW::Mechanize->new(
29 autocheck => 1,
30 cookie_jar => undef,
31 );
32
33 our $step = 0;
34 our @ranges;
35
36 my $dir = '/tmp/isi/';
37 rmtree $dir if -e $dir;
38 mkdir $dir;
39
40 sub save_mech {
41 my $path = shift;
42 $step++;
43 my $base_path = sprintf('%s/%04d', $dir,$step);
44 $path ||= $base_path;
45 $path .= $mech->{ct} =~ m{html}i ? '.html' : '.txt';
46 $mech->save_content( $path );
47 warn "# [$step] $path ", -s $path, " ", $mech->ct, "\n";
48 open(my $dump, '>', "$base_path.dump.txt");
49 $mech->dump_all($dump);
50 }
51
52 warn "# get session";
53 $mech->get( 'http://isiknowledge.com/?DestApp=WOS' );
54 save_mech;
55
56 sub search {
57 warn "# advanced serach";
58 $mech->follow_link( url_regex => qr/AdvancedSearch/ );
59 save_mech;
60
61 warn "# cookie_jar ", dump $mech->cookie_jar;
62
63 my $q_this = $q;
64
65 if ( @ranges ) {
66 $q_this .= ' AND (' . join(' OR ', map { "PY=$_" } @{ shift @ranges } ) . ')';
67 }
68
69 warn "# submit_form search: $q_this\n";
70 $mech->submit_form(
71 fields => {
72 'value(input1)' => $q_this,
73 },
74 );
75 save_mech;
76
77 warn "# summary";
78 $mech->follow_link( url_regex => qr/summary/ );
79 save_mech;
80 }
81
82 sub get_results {
83 my $desc = shift;
84 my $from = 1;
85
86 while ( 1 ) {
87
88 my $to = $from + $range_size;
89
90 warn "# submit_form results $from - $to\n";
91
92 $mech->submit_form(
93 form_name => 'summary_output_form',
94 fields => {
95 record_select_type => 'range',
96 mark_from => $from,
97 mark_to => $to,
98 mark_id => 'WOS',
99
100 qo_fields => 'fullrecord',
101 citedref => 'citedref',
102
103 save_options => 'plain_text',
104
105 fields => 'Full',
106 format => 'save',
107 },
108 button => 'save',
109 );
110 save_mech;
111
112
113 if ( $mech->content =~ m{invalid API call} ) {
114 $mech->back;
115 last;
116 }
117
118
119 my $path = "/tmp/isi.$q.$from-$to";
120 $path .= '.' . $desc if $desc;
121
122 warn "save $from - $to into $path\n";
123 $mech->follow_link( url_regex => qr/save_file/ );
124 save_mech $path;
125
126 $from += $range_size - $overlap;
127
128 $mech->back;
129 $mech->back;
130 #save_mech;
131 }
132 }
133
134
135 sub citations {
136 warn "# citation report";
137 $mech->follow_link( url_regex => qr/search_mode=CitationReport/ );
138 save_mech;
139
140 warn "view citing articles";
141 $mech->follow_link( url_regex => qr/search_mode=TotalCitingArticles/ );
142 save_mech;
143 }
144
145 sub years {
146 my $years_url = $mech->find_link( url_regex => qr/ra_name=/ );
147 if ( ! $years_url ) {
148 warn "W: can't find ra_name link\n";
149 return;
150 }
151 $years_url = $years_url->url_abs;
152 warn "## $years_url";
153 if ( $years_url !~ s{ra_name=\w+}{ra_name=PublicationYear} ) {
154 warn "W: no ra_name in $years_url\n";
155 return;
156 }
157 warn "# refine years (hidden by javascript)";
158 # warn "http://apps.isiknowledge.com/RAMore.do?product=WOS&search_mode=TotalCitingArticles&SID=T1o6bChdN9PGP1LN1Nh&qid=3&ra_mode=more&ra_name=PublicationYear&db_id=WOS&viewType=raMore\n$years_url\n";
159 $mech->get( $years_url );
160 save_mech;
161
162 my $html = $mech->content;
163 my $years;
164 while ( $html =~ s{<label.+?PublicationYear.+?>(\d{4})\s\(([\d,]+)\)</label>}{} ) {
165 my ( $year, $count ) = ( $1, $2 );
166 $count =~ s{,}{}g;
167 $years->{$year} = $count;
168 }
169 warn "# years ",dump $years;
170 $mech->back;
171
172 my @y = sort keys %$years;
173
174 @ranges = ();
175
176 if ( $cites_by_year ) {
177 push @ranges, [ $_ ] foreach @y;
178 warn "# cites_by_year ranges ", dump @ranges;
179 return;
180 }
181
182 my $y = shift @y;
183 my $size = $years->{$y};
184
185 my $cites_range;
186 $cites_range = [$y] if $y;
187
188 foreach my $y ( @y ) {
189 if ( $size + $years->{$y} > $max_cites ) {
190 push @ranges, $cites_range;
191 warn "# cites_range $size years ",dump( $cites_range ),$/;
192
193 $cites_range = [];
194 $size = 0;
195 }
196 $size += $years->{$y};
197 push @$cites_range, $y;
198 }
199
200 if ( $cites_range ) {
201 push @ranges, $cites_range;
202 warn "# cites_range $size years ",dump( $cites_range ), " FINAL\n"
203 }
204
205 warn '# ranges ', dump @ranges;
206 @ranges = () if $#ranges == 1; # just take all
207
208 return $years;
209 }
210
211 search;
212 years;
213 get_results unless $skip_results;
214
215
216 citations;
217
218 do {
219 my $part;
220 if ( @ranges ) {
221 $part .= $ranges[0]->[0] . '.';
222 search;
223 citations;
224 }
225 $part .= 'citing';
226 get_results $part;
227 } while ( @ranges );
228

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